Plot cells with radius value — plot_cells_with_scale • TopKAT

This function plots a simplicial complex with the cells as points and the given radius value connecting them.

Usage

plot_cells_with_scale(image, threshold, title)

Arguments

image: A data.frame containing the cell information for a single image.
threshold: Radius to plot
title: Title for the plot

Value

Returns a ggplot scatterplot of the data with edges of length threshold connecting the cells.

Examples

require(magrittr)
plot_cells_with_scale(
  image = data1.df %>% dplyr::filter(PID == 51),
  threshold = 10,
  title = "Example Plot of Cells"
)