MIBI Data from study in Triple Negative Breast Csancer
tnbc.Rd
This dataset contains simulated data. The images were split into two groups. The first group was simulated to have large squares. The second group was simulated to have loops. This dataset contains 100 samples.
Format
tnbc
A data frame with 175497 rows and 8 columns:
- SampleID
Patient ID
- Group
Indicates cell type. 2=immune cell, 6=keratin-positive tumor cell
- immuneGroup
Indicates more granular immune cell type defintion
- x
x-coordinate of each cell
- y
y-coordinate of each cell
- Survival_days_capped*
Time-to-death in days
- Censored
Survival event indicator (1=had event; 0=censored)
- Class
Tumor microenvironment class. 0=mixed; 1=compartmentalized; 2=cold